Fish Physiology in support of Sustainable Aquaculture
Deadlines
Opening of abstract submissions and registrations: 15 September 2025Deadline to submit indicative title and summary: 30 November 2025Deadline for final abstract submissions: 01 May 2026Early bird registration deadline: 01 March 2026
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Soutenance publique de thèse de doctorat en Sciences biologiques - Aishwarya Saxena
Abstract
Primarily described as an alarmone, secondary messenger (p)ppGpp, when accumulated, binds to many targets involved in DNA replication, translation, and transcription. In the asymmetrically-dividing a-proteobacterium Caulobacter crescentus, (p)ppGpp has been shown to strongly impact cell cycle progression and differentiation, promoting the non-replicating G1/swarmer phase. Mutations in the major subunits of transcriptional complex, b or b’ subunits, were able to display the (p)ppGpp-related phenotypes even in the absence of the alarmone. We identified that the transcriptional holo-enzyme, RNA polymerase (RNAP) is a primary target of (p)ppGpp in C. crescentus. Furthermore, mutations that inactivate (p)ppGpp binding to RNAP annihilated the (p)ppGpp-related phenotypes and phenocopied a (p)ppGpp0 strain. Our RNAseq analysis further elucidated the changes in the transcriptional landscape of C. crescentus cells displaying different (p)ppGpp levels and expressing RNAP mutants. Since the DNA replication initiation protein DnaA is required to exit the G1 phase, we observed that it was significantly less abundant in cells accumulating (p)ppGpp. We further explored its proteolysis under the influence of (p)ppGpp. Our work suggests that (p)ppGpp regulates cell cycle and differentiation in C. crescentus by reprogramming transcription and triggering proteolytic degradation of key cell cycle regulators by yet unknown mechanisms. In Part II, we identified two σ factors belonging to the ECF family that might be involved in this (p)ppGpp-accompanied phenotypes. In Part III, we propose an overlapping role of the ω subunit, RpoZ, and the heat shock subunit, RpoH, in carbon metabolism.JuryProf. Gipsi LIMA MENDEZ (UNamur), PresidentProf Régis HALLEZ (UNamur), SecretaryDr Emanuele BIONDI (CNRS-Université Paris-Saclay)Prof. Justine COLLIER (University of Lausanne)Dr Marie DELABY (Université de Montréal)
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Soutenance publique de thèse de doctorat en Sciences biologiques - Nathalie Leroux
Abstract
Estrogens originating from human and animal excretion, as well as from anthropogenic sources such as cosmetics, plastics, pesticides, detergents, and pharmaceuticals, are among the most concerning endocrine-disrupting compounds in aquatic environments due to their potent estrogenic activity. While their effects on fish reproduction are well documented, their impact on development, particularly metamorphosis, remains poorly studied. This hormonal transition, mainly controlled by the thyroid axis, is essential for the shift from the larval to the juvenile stage in teleosts.The effects of two contraceptive estrogens on zebrafish (Danio rerio) metamorphosis were evaluated: 17α-ethinylestradiol (EE2), a synthetic reference estrogen, and estetrol (E4), a natural estrogen recently introduced in a new combined oral contraceptive formulation. Continuous exposure from fertilization to the end of metamorphosis allowed the assessment of morphological changes, disruptions of the thyroid axis, and modifications of additional molecular pathways potentially involved in metamorphic regulation.EE2 induced significant delays and disturbances in metamorphosis, affecting both internal and external morphological traits, confirming its role as an endocrine disruptor of concern. In contrast, E4 did not cause any detectable morphological alterations even at concentrations far exceeding those expected in the environment, indicating a limited ecotoxicological risk. Molecular analyses showed that EE2 strongly affected thyroid signaling and energy metabolism during metamorphosis, whereas E4 induced only minor transcriptional and proteomic changes.This study provides the first evidence that EE2 can disrupt zebrafish metamorphosis and highlights the importance of including this developmental stage in ecotoxicological assessments. The results also suggest a larger environmental safety margin for E4, although further research is needed to clarify the mechanisms linking estrogen exposure to metamorphic regulation.JuryProf. Frederik DE LAENDER (UNamur), PrésidentProf. Patrick KESTEMONT (UNamur), SecrétaireDr Sébastien BAEKELANDT (UNamur)Dr Valérie CORNET (UNamur)Prof. Jean-Baptiste FINI (Muséum National d’Histoire Naturelle de Paris)Dr Marc MULLER (ULiège)Prof. Veerle DARRAS (KULeuven)
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Soutenance publique de thèse de doctorat en sciences biologiques - Andry Rabezanahary
JuryProf. Eli THORÉ (UNamur), PrésidentProf. Patrick KESTEMONT (UNamur), SecrétaireProf. Ranjàna RANDRIANARIVO (Université d’Antananarivo)Dr Valérie CORNET (UNamur)Dr Omayma MISSAWI (UNamur)Prof. Catherine MOUNEYRAC (Université Catholique de l’Ouest)Prof. Gauthier EPPE (ULiège)RésuméThe widespread production and use of plastics have led to their continuous release into the environment. Microplastics (MPs) are now ubiquitous in aquatic ecosystems, where their bioavailability to organisms and potential entry into the food web raise serious environmental and public health concerns. Substantial progress has been made in understanding MP toxicity, and their hazardous potential is now widely acknowledged. However, MP toxicity studies remain complex, as multiple particle characteristics, such as size, shape, polymer type, and sorbed contaminants might influence both bioavailabilityTo bridge this gap, the present thesis adopted a dual, complementary approach: (i) characterizing the environmental occurrence and bioavailability of MPs, and (ii) assessing the ecological relevance of using environmentally derived MPs in in vivo toxicity experiments.Overall, this thesis provides insights into the reproductive and transgenerational effects of environmentally relevant MPs while underscoring the importance of considering particle–pollutant interactions. By combining in situ field data with in vivo laboratory experiments, it demonstrates that the use of environmentally derived MPs represents a more realistic and ecologically meaningful approach to hazard characterization. Further studies should be carried out in this same perspective to generate robust, exploitable data and contribute to establishing a comprehensive MP risk characterization.
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Soutenance publique de thèse de doctorat en sciences géographiques - Clémence Idukunda
JuryProf. Nicolas DENDONCKER (UNamur), PrésidentProf. Sabine HENRY (UNamur), SecrétaireDr Sébastien DUJARDIN (UNamur)Prof. Pierre OZER (ULiège)Prof. Emmanuel TWARABAMENYE (Université du Rwanda)Prof. Caroline MICHELLIER (MRAC et UCLouvain)AbstractThis research investigates community vulnerability to landslides and floods in Northwestern Rwanda, hazards that frequently interact to produce compound disasters. The research focused on understanding the institutional, social, and structural factors that shape vulnerability and adaptive capacity in this disaster-prone region. Using a mixed-methods approach at local-scale, including institutional analysis, household surveys (n = 904), and field observations, the research highlights how vulnerability is shaped by socio-economic conditions, weak institutional coordination, and limited adaptive capacity. A Contextualized Vulnerability Index (CoVI) was developed to map vulnerability patterns, revealing particularly high vulnerability in landslide-prone and dual-hazard zones. The analysis of adaptive capacity showed that while awareness of hazards is high due to lived experiences, financial constraints, and limited technical knowledge hinder communities’ ability to adapt effectively. The study contributes to the literature on social vulnerability and disaster risk reduction by emphasizing the importance of locally grounded, evidence-based strategies to strengthen community resilience in hazard-prone regions.
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46th annual BCLAS sypmposium
2025 theme: Stress and emotions in animals
The purpose of the symposium aligns with the missions of BCLAS to promote the replacement, reduction and refinement of laboratory animal use by driving reflection, sharing information, providing education and support to the scientific community, authorities and public, in order to lead to an ethical, responsible and qualitative research enabling further improvement in human & animal health.
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ILEE-NARILIS lunch seminar
Charting the DNA methylome landscape in cancer, chronic disease and phenotype
Abstract: Our team has developed some of the first pipelines for genome-scale DNA methylation analysis. Our work has revealed aberrant methylation and expression patterns in several cancer types and revealed new mechanism of epigenetic regulation in cancer cells. We are now applying cutting-edge whole genome scale DNA methylation analysis in tissues as well as well as in cell free DNA (epigenetic liquid biopsy) and epigenetic editing platforms to investigate clinically relevant biomedical questions in cancer (for example, methylation map of colorectal, prostate, lung cancer and pancreatic cancer patients). Our work in epigenetic editing has implication in revealing causal function and new epigenetic regulation. In this talk, I will present the key findings from some of our works over the years and also elaborate on some recent and future directions in understanding the role of DNA methylation events in cancer metastasis, early detection, and treatment monitoring in solid cancers and also in chronic diseases and phenotype. More information on the ILEE website
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ILEE-NISM (lunch) seminar
High-Sensitivity Birefringence Mapping Using Near-Circularly Polarized Light
I will describe several techniques for mapping a two-dimensional birefringence distribution, which can be classified according to the optical schemes and principles of work:Illumination geometry (transmitted light/reflected light)Image acquisition (sequential acquisition/simultaneous acquisition)Polarization control (electrically controlled variable retardance/mechanical rotation).This classification facilitates a comparative analysis of the capabilities and limitations in these methods for birefringence characterization. Polychromatic polarizing microscopy (PPM) provides unique capabilities to alternative methods. It leverages vector interference to generate vivid, full-spectrum colors at extremely low retardances, down to < 10 nm. PPM is a significant departure from conventional polarizing microscopes that rely on Newton interference, which requires retardances above 400 nm for color formation. Furthermore, PPM's color output directly reflects the orientation of the birefringent material, a feature absent in conventional microscopy where color is solely determined by retardance.Joint seminar of ILEE & NISM!Le séminaire est accessible à des personnes externes également, pas besoin de s'inscrire.
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Soutenance publique de thèse de doctorat en Sciences physiques - Andrea Scarmelotto
Abstract
Radiotherapy is a cornerstone of cancer treatment and is currently administered to approximately half of all cancer patients. However, the cytotoxic effects of ionizing radiation on normal tissues represent a major limitation, as they restrict the dose that can be safely delivered to patients and, consequently, reduce the likelihood of effective tumor control. In this context, delivering radiation at ultra-high dose rates (UHDR, > 40 Gy/s) is gaining increasing attention due to its potential to spare healthy tissues surrounding the tumor and to prevent radiation-induced side effects, as compared to conventional dose rates (CONV, on the order of Gy/min).The mechanism underlying this protective effect—termed the FLASH effect—remains elusive, driving intensive research to elucidate the biological processes triggered by this type of irradiation.In vitro models offer a valuable tool to support this research, allowing for the efficient screening of various beam parameters and biological responses in a time- and cost-effective manner. In this study, multicellular tumor spheroids and normal cells were exposed to proton irradiation at UHDR to evaluate its effectiveness in controlling tumor growth and its cytotoxic impact on healthy tissues, respectively.We report that UHDR and CONV irradiation induced a comparable growth delay in 3D tumor spheroids, suggesting similar efficacy in tumor control. In normal cells, both dose rates induced similar levels of senescence; however, UHDR irradiation led to lower apoptosis induction at clinically relevant doses and early time points post-irradiation.Taken together, these findings further highlight the potential of UHDR irradiation to modulate the response of normal tissues while maintaining comparable tumor control.JuryProf. Thomas BALLIGAND (UNamur), PrésidentProf. Stéphane LUCAS (UNamur), SecrétaireProf. Carine MICHIELS (UNamur)Dr Sébastien PENNINCKX (Hôpital Universitaire de Bruxelles)Prof. Cristian FERNANDEZ (Université de Bern)Dr Rudi LABARBE (IBA)
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PhD Student Day - UNamur & UCLouvain
La deadline d'inscription et de soumission pour les abstracts : 20 août 2025.
Plus d'infos sur le site internet de l'Institut NARILIS
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Soutenance publique de thèse de doctorat en sciences géologiques - Julien Poot
JuryProf. Max COLLINET (UNamur), présidentProf. Johan YANS (UNamur), secrétaireProf. Flavien CHOULET (Université Marie et Louis Pasteur)Dr Alexandre FELTEN (UNamur)Prof. Mohammed BOUABDELLAH (Université Mohammed IV Polytechnique)Prof. Nadine MATTIELLI (Université libre de Bruxelles)Dr Augustin DEKONINCK (UMons)RésuméSupergene processes are responsible for the redistribution of metals near the surface and can form economically significant mineral deposits. This PhD thesis investigates the evolution (genesis and timing) of supergene mineralization in polymetallic systems from Morocco (Anti-Atlas and Atlas) and France (Provence). The study combines field observations, petrography, geochemistry, stable isotopes analyses and experimental oxidation to provide a multiscale understanding from microscopic characterization to the regional geological evolution.Stable Cu and Fe isotopes show singular fractionation in each deposit, which primarily depends on the primary ore isotopic composition. In addition, specific minerals (i.e., arsenates) may strongly impact Cu fractionation of later formed minerals (i.e., malachite), which can lead to extremely variable Cu isotope compositions across deposits. Hence, Cu and Fe isotopes must be considered as site specific. Experimental investigations complete geological data by quantifying oxidation rates of pyrite and galena under various conditions. These results highlight that the timing of weathering is reproductible and fit with natural examples studied in this thesis via (U–Th)/He and K–Ar geochronology. However, pyrite oxidation (4.3 µm/year) is faster than galena, which may have a catalytic effect on other sulfides in polymetallic deposits.Overall, supergene mineralization reflects combined controls from mineralogy, host rocks, fluids, climate and tectonics. This work refines genetic models and provides new tools to describe and constrain secondary mineralization, and their potential impact on metallurgical processes.
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VENOM2 : Quand les venins animaux ouvrent de nouvelles pistes contre le cancer
Soutenu par le programme Win4SpinOff du SPW Recherche, et portés par les Universités de Liège au sein du Laboratoire de Spectrométrie de masse (MSLab, Faculté des sciences), et de Namur, au sein du Laboratoire de Biologie Moléculaire du Cancer, (NARILIS, LBMC, Faculté de médecine), le projet VENOM2 explore le potentiel des peptides issus de venins animaux pour développer de nouvelles solutions diagnostiques et thérapeutiques en oncologie.
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