Résultats de recherche

Abstract Primarily described as an alarmone, secondary messenger (p)ppGpp, when accumulated, binds to many targets involved in DNA replication, translation, and transcription. In the asymmetrically-dividing a-proteobacterium Caulobacter crescentus, (p)ppGpp has been shown to strongly impact cell cycle progression and differentiation, promoting the non-replicating G1/swarmer phase. Mutations in the major subunits of transcriptional complex, b or b’ subunits, were able to display the (p)ppGpp-related phenotypes even in the absence of the alarmone. We identified that the transcriptional holo-enzyme, RNA polymerase (RNAP) is a primary target of (p)ppGpp in C. crescentus. Furthermore, mutations that inactivate (p)ppGpp binding to RNAP annihilated the (p)ppGpp-related phenotypes and phenocopied a (p)ppGpp0 strain. Our RNAseq analysis further elucidated the changes in the transcriptional landscape of C. crescentus cells displaying different (p)ppGpp levels and expressing RNAP mutants. Since the DNA replication initiation protein DnaA is required to exit the G1 phase, we observed that it was significantly less abundant in cells accumulating (p)ppGpp. We further explored its proteolysis under the influence of (p)ppGpp. Our work suggests that (p)ppGpp regulates cell cycle and differentiation in C. crescentus by reprogramming transcription and triggering proteolytic degradation of key cell cycle regulators by yet unknown mechanisms. In Part II, we identified two σ factors belonging to the ECF family that might be involved in this (p)ppGpp-accompanied phenotypes. In Part III, we propose an overlapping role of the ω subunit, RpoZ, and the heat shock subunit, RpoH, in carbon metabolism.JuryProf. Gipsi LIMA MENDEZ (UNamur), PresidentProf Régis HALLEZ (UNamur), SecretaryDr Emanuele BIONDI (CNRS-Université Paris-Saclay)Prof. Justine COLLIER (University of Lausanne)Dr Marie DELABY (Université de Montréal)

Abstract Estrogens originating from human and animal excretion, as well as from anthropogenic sources such as cosmetics, plastics, pesticides, detergents, and pharmaceuticals, are among the most concerning endocrine-disrupting compounds in aquatic environments due to their potent estrogenic activity. While their effects on fish reproduction are well documented, their impact on development, particularly metamorphosis, remains poorly studied. This hormonal transition, mainly controlled by the thyroid axis, is essential for the shift from the larval to the juvenile stage in teleosts.The effects of two contraceptive estrogens on zebrafish (Danio rerio) metamorphosis were evaluated: 17α-ethinylestradiol (EE2), a synthetic reference estrogen, and estetrol (E4), a natural estrogen recently introduced in a new combined oral contraceptive formulation. Continuous exposure from fertilization to the end of metamorphosis allowed the assessment of morphological changes, disruptions of the thyroid axis, and modifications of additional molecular pathways potentially involved in metamorphic regulation.EE2 induced significant delays and disturbances in metamorphosis, affecting both internal and external morphological traits, confirming its role as an endocrine disruptor of concern. In contrast, E4 did not cause any detectable morphological alterations even at concentrations far exceeding those expected in the environment, indicating a limited ecotoxicological risk. Molecular analyses showed that EE2 strongly affected thyroid signaling and energy metabolism during metamorphosis, whereas E4 induced only minor transcriptional and proteomic changes.This study provides the first evidence that EE2 can disrupt zebrafish metamorphosis and highlights the importance of including this developmental stage in ecotoxicological assessments. The results also suggest a larger environmental safety margin for E4, although further research is needed to clarify the mechanisms linking estrogen exposure to metamorphic regulation.JuryProf. Frederik DE LAENDER (UNamur), PrésidentProf. Patrick KESTEMONT (UNamur), SecrétaireDr Sébastien BAEKELANDT (UNamur)Dr Valérie CORNET (UNamur)Prof. Jean-Baptiste FINI (Muséum National d’Histoire Naturelle de Paris)Dr Marc MULLER (ULiège)Prof. Veerle DARRAS (KULeuven) 

Abstract Deep learning has become an extremely important technology in numerous domains such as computer vision, natural language processing, and autonomous systems. As neural networks grow in size and complexity to meet the demands of these applications, the cost of designing and training efficient models continues to rise in computation and energy consumption. Neural Architecture Search (NAS) has emerged as a promising solution to automate the design of performant neural networks. However, conventional NAS methods often require evaluating thousands of architectures, making them extremely resource-intensive and environmentally costly.This thesis introduces a novel, energy-aware NAS pipeline that operates at the intersection of Software Engineering and Machine Learning. We present CNNGen, a domain-specific generator for convolutional architectures, combined with performance and energy predictors to drastically reduce the number of architectures that need full training. These predictors are integrated into a multi-objective genetic algorithm (NSGA-II), enabling an efficient search for architectures that balance accuracy and energy consumption.Our approach explores a variety of prediction strategies, including sequence-based models, image-based representations, and deep metric learning, to estimate model quality from partial or symbolic representations. We validate our framework across three benchmark datasets, CIFAR-10, CIFAR-100, and Fashion-MNIST, demonstrating that it can produce results comparable to state-of-the-art architectures with significantly lower computational cost. By reducing the environmental footprint of NAS while maintaining high performance, this work contributes to the growing field of Green AI and highlights the value of predictive modelling in scalable and sustainable deep learning workflows. Jury Prof. Wim Vanhoof - University of Namur, BelgiumProf. Gilles Perrouin - University of Namur, BelgiumProf. Benoit Frénay - University of Namur, BelgiumProf. Pierre-Yves Schobbens - University of Namur, BelgiumProf. Clément Quinton - University of Lille, FranceProf. Paul Temple- University of Rennes, FranceProf. Schin’ichi Satoh - National Institute of Informatics, Japon

Abstract Plastic pollution has emerged as a pervasive environmental threat, with micro- and nanoplastics (MPs and NPs) accumulating across ecosystems and organisms, including humans. Their ability to adsorb and transport contaminants raises critical concerns for both environmental and public health.This thesis investigates the developmental neurotoxicity of MPs and NPs in zebrafish (Danio rerio), emphasizing the influence of particle size and mixture toxicity. NPs were shown to cross the embryonic chorion, disrupt physiological functions, and induce anxiety-like behaviour, whereas MPs mainly altered gene expression related to neurodevelopment. When co-exposed with methylmercury (MeHg), NPs enhanced MeHg accumulation in the brain and sensory organs, exacerbating its neurotoxic effects. Notably, the mixture induced severe hypoactivity, impaired lipid metabolism and neurotransmission, and increased mortality.These findings highlight the critical need to assess plastic particle toxicity not only in isolation but also in environmentally relevant mixtures. NPs, due to their small size and high reactivity, may act as vectors for toxicants like MeHg, amplifying their effects during sensitive developmental stages. Jury Prof. Frédéric SILVESTRE (UNamur), PrésidentProf. Patrick KESTEMONT (UNamur), SecrétaireDr Valérie CORNET (UNamur)Prof. Eli THORÉ (UNamur)Prof. Jérôme CACHOT (Université de Bordeaux)Dr Krishna DAS (Université de Liège)

L'équipe du professeur Xavier De Bolle vient de publier dans la prestigieuse revue EMBO Journal du groupe Springer Nature.  Sa découverte ? Un canal de transport à lipides au travers de la membrane cellulaire de Brucella, cette bactérie responsable de la Brucellose chez les bovins. Cette trouvaille pourrait être exploitée notamment pour générer des souches atténuées de la bactérie, processus utilisé dans la fabrication des vaccins.  

Près de 10 000 kilomètres séparent la Belgique du Japon, un pays qui fascine, notamment pour sa culture riche et pleine de contrastes. Les chercheurs de l’UNamur entretiennent des liens étroits avec plusieurs institutions nipponnes, notamment dans les domaines de l’informatique, des mathématiques ou encore du jeu vidéo. Coup de projecteur sur quelques-unes de ces collaborations.

C’est une belle reconnaissance pour l’excellence de la recherche menée à l’Université de Namur : la faculté d’informatique a été sollicitée pour rejoindre le prestigieux réseau Informatics Europe, qui rassemble les départements et facultés d’informatique les plus dynamiques à travers l’Europe.

Une équipe internationale de chercheurs vient de publier dans la prestigieuse revue Light : Science & Applications (LSA) du groupe Nature.  Les équipes des professeurs Michaël Lobet et Alexandre Mayer (Université de Namur) ont collaboré avec l’équipe du professeur Shanhui Fan, l’un des plus grands spécialistes en la matière, de la prestigieuse Université de Stanford, en Californie (USA).  Le résultat : un article intitulé « Twist-Induced Beam Steering and Blazing Effects in Photonic Crystal Devices” ou l’étude de la déviation d’un faisceau par torsion dans les dispositifs à cristaux photoniques.  Allez, on re-twiste à l’UNamur ! 

Abstract This work demonstrates that polymer-coated gold nanoparticles can function not only as radiosensitizers but also as agents for macrophage reprogramming. Specifically, we show that these nanoparticles can repolarize tumor-associated macrophages from the immunosuppressive M2 phenotype to the pro-inflammatory M1 phenotype—a process further enhanced by clinically relevant doses of X-ray radiation. Among the four nanoparticle formulations tested, 50 nm PVP-coated gold nanoparticles were particularly effective in promoting macrophage repolarization and reducing pancreatic cancer cell viability in co-culture, both with and without radiation. These findings highlight a promising strategy to enhance the efficacy of cancer radiotherapy. Jury Prof. Julien COLAUX (UNamur), PrésidentProf. Anne-Catherine HEUSKIN (UNamur), SecrétaireProf. Carine MICHIELS (UNamur)Prof. Henri-François RENARD (UNamur)Prof. Michel MOUTSCHEN (ULiège)Dr Dimitri STANICKI (UMons)Prof. Devika CHITHRANI (University of Victoria)

Le mercure et l'Océan : leçons du passé et enjeux pour le futur Polluant hautement toxique, tristement connu depuis la catastrophe de Minamata au Japon dans les années 1950, le mercure s’accumule depuis la révolution industrielle dans les océans où il menace la faune marine et l'Homme. Sa surveillance et sa réduction constituent aujourd’hui un enjeu mondial, inscrit dans la Convention de Minamata signée par 147 pays.Cette leçon sera suivi d'un drink.Save the date!Plus d'infos ici bientôt... Je m'inscris

Le Namur Digital Institute (NaDI) lance un cycle de rendez-vous originaux : « Les Séances du Numérique ». Des films suivis de débats avec des experts et expertes pour comprendre les défis du numérique et stimuler la réflexion collective. Un projet porté par Anthony Simonofski, Anne-Sophie Collard, Benoît Vanderose et Fanny Barnabé.