Match-Box Web Server 1.3

Guy Baudoux, Isabelle Reginster, Pascal Briffeuil, Eric Depiereux and Ernest Feytmans.

Molecular Biology Research Unit, The University of Namur, Belgium.

Project supported by the Walloon Government, Federal State of Belgium.

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Information about the available scoring matrices.

The following scoring matrices are available:

References:

  1. Henikoff, S. & Henikoff, J.G. (1992). Amino acid substitution matrices from protein blocks. Proc. Natl. Acad. Sci. USA, 89, 10915-10919.

  2. Gonnet, G.H., Cohen, M.A. & Benner, S.A. (1992). Exhaustive matching of the entire protein database. Science, 256, 1443-1445

  3. Johnson, M.S..& Overington, J.P. (1993). A Structural basis for sequence comparisons. An evaluation of Scoring methodologues. J. Mol. Biol., 233, 716-738.

  4. Dayhoff, M.O., Schwartz, R.M. & Orcutt, B.C. (1978). A model for evolutionary change. In Atlas of protein Sequence and Structure (Dayhoff, M.O., ed.), vol. 5, suppl. 3, pp. 345-358, National Biomedical Research Foundation, Washington, D.C.

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